The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription Factor |
Target ORF/Genes |
References |
Evidence Code |
Evidence Experiment |
Association Type |
Strain |
Environmental Group |
Environmental Condition |
Log2FC |
|
Msn2p
|
YAL005C
|
PubMed
Epstein CB et al., Molecular biology of the cell, 2001 Feb;12(2):297-308Epstein CB et al., Molecular biology of the cell, 2001 Feb;12(2):297-308 |
Indirect |
Microarray analysis - wt vs TF mutant |
Positive |
S288c |
Stress |
YPD medium + 0,05M succinic acid, pH 4,0 |
N/A |
PubMed
Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 |
Direct |
Chip-on-chip |
N/A |
S288c |
N/A |
N/A |
N/A |
PubMed
Ni L et al., Genes & development, 2009 Jun 1;23(11):1351-63Ni L et al., Genes & development, 2009 Jun 1;23(11):1351-63 |
Direct |
Chip-on-chip |
N/A |
S288c |
Stress |
SD medium + NaCl 0,6M 30' |
N/A |
PubMed
Huebert DJ et al., Molecular and cellular biology, 2012 May;32(9):1645-53Huebert DJ et al., Molecular and cellular biology, 2012 May;32(9):1645-53 |
Direct |
Chip-on-chip |
N/A |
S288c |
Stress |
H2O2 treatment |
N/A |
PubMed
Stewart-Ornstein J et al., Current biology : CB, 2013 Dec 2;23(23):2336-45Stewart-Ornstein J et al., Current biology : CB, 2013 Dec 2;23(23):2336-45 |
Indirect |
GFP - wt vs TF overexpression |
Positive |
S288c |
Stress |
Estradiol induced |
N/A |
PubMed
Elfving N et al., Nucleic acids research, 2014 May;42(9):5468-82Elfving N et al., Nucleic acids research, 2014 May;42(9):5468-82 |
Direct |
ChIP |
N/A |
S288c |
Carbon source quality/availability |
ESR induction: glucose-to-glycerol switch |
N/A |
PubMed
Kuang Z et al., eLife, 2017 Sep 26;6():Kuang Z et al., eLife, 2017 Sep 26;6(): |
Direct |
ChIP-seq |
N/A |
BY5764 |
Unstressed log-phase growth (control) |
YPD 30.C |
N/A |
|