Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor
Target
ORF/Genes
References Evidence
Code
Evidence
Experiment
Association
Type
Strain Environmental
Condition
Log2FC
Rox1p YCL005W-A PubMed external link Liu R et al., Metabolic engineering, 2019 Jan;51():50-58Liu R et al., Metabolic engineering, 2019 Jan;51():50-58 Indirect RNA-seq - wt vs TF mutant Positive BY4741 6% ethanol N/A
PubMed external link Horkai D et al., PLoS biology, 2023 Aug;21(8):e3002245Horkai D et al., PLoS biology, 2023 Aug;21(8):e3002245 Indirect RNA-seq analysis - WT vs TF Deletion Positive MEP YPD,48h: Cells were grown in YP + 2% glucose (YPD) at 30°C, 200 rpm and mother cells were harvested 48h after estradiol addition (added at 2h post-inoculation). 0.384402
PubMed external link van der Horst SC et al., Nature communications, 2025 Feb 6;16(1):1416van der Horst SC et al., Nature communications, 2025 Feb 6;16(1):1416 Indirect RNA-seq analysis - WT vs TF Deletion Negative W303 60 min: RNA-seq performed in YPAD medium. Overnight cultures were diluted in fresh YPAD and grown for 3 h. Cells were then synchronized in G1 by α-factor treatment for 2 h, washed once in YPAD, and released into YPAD containing 200 mM hydroxyurea (HU). Samples were collected at t=60min: 60 min after release into HU (replication stress condition) -0.456968