Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Rpn4p YDR011W PubMed external link Salin H et al., BMC genomics, 2008 Jul 15;9():333Salin H et al., BMC genomics, 2008 Jul 15;9():333 Indirect Microarray analysis - WT vs TF Deletion Negative BY4742 Unstressed log-phase growth (control) Grown in YPD medium at 30 ºC to and A600 of 0.5. Transcription factor gene deletion. -0.418
Indirect Microarray analysis - WT vs TF Deletion Negative BY4742 Stress Grown in YPD medium at 30 ºC to and A600 of 0.5. Sodium selenite (1 mM) treatment for 40 min. Transcription factor gene deletion. -0.231
Indirect Microarray analysis - WT vs TF Deletion Negative BY4742 Stress Grown in YPD medium at 30 ºC to and A600 of 0.5. Sodium selenite (1 mM) treatment for 60 min. Transcription factor gene deletion. -0.217
Indirect Microarray analysis - WT vs TF Deletion Negative BY4742 Stress Grown in YPD medium at 30 ºC to and A600 of 0.5. Sodium selenite (1 mM) treatment for 80 min. Transcription factor gene deletion. -0.3
PubMed external link Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - WT vs TF Deletion Positive BY4741; S288C; R1158 Unstressed log-phase growth (control) Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. 0.29955519109612
PubMed external link Kruegel U et al., PLoS genetics, 2011 Sep;7(9):e1002253Kruegel U et al., PLoS genetics, 2011 Sep;7(9):e1002253 Indirect Proteomics - wt vs TF mutant Negative S288c Unstressed log-phase growth (control) YPD medium; mid-log phase N/A
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 Unstressed log-phase growth (control) YPD medium, 25.C N/A