S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition	Log2FC
Pho4p	YDR017C	PubMed Nishizawa M et al., PLoS biology, 2008 Dec 23;6(12):2817-30	Direct	Chip-on-chip	N/A	S288c	YNB medium without phosphate + 0,2microM (low Pi; phosphate limitation)	N/A
		PubMed He BZ et al., eLife, 2017 May 9;6():He BZ et al., eLife, 2017 May 9;6():	Indirect	RNA-seq analysis - WT vs TF Deletion	Positive	K699	100 ml of cell culture grown to OD600nm (600 nm) of 1.5.	1.58504730645314
			Indirect	RNA-seq analysis - WT vs TF Deletion	Positive	K699	Grown in phosphate-free SC medium (Phosphate starvation) at 30°C with shaking. All transcriptional profiling experiments were done in the pho80∆ background. Transcription factor gene deletion.	1.58504730645314
		PubMed Gurvich Y et al., PLoS biology, 2017 Dec;15(12):e2002039	Indirect	RNA-seq - wt vs TF mutant	Positive	BY4741 PHO4SA12346 allele	BY4741 PHO4SA12346 allele ; SC medium; Low P(i) concentration; 30.C; mid-log phase	N/A