S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition	Log2FC
Rap1p	YDR046C	PubMed Chua G et al., Proceedings of the National Academy of Sciences of the United States of America, 2006 Aug 8;103(32):12045-50	Indirect	Microarray analysis - wt vs TF overexpression	Negative	N/A	Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h	N/A
		PubMed Lavoie H et al., PLoS biology, 2010 Mar 9;8(3):e1000329	Direct	Chip-on-chip	N/A	S288c	YPD	N/A
		PubMed Buechel ER et al., FEBS letters, 2024 Jan;598(2):169-186	Direct	ChEC-seq2	N/A	BY4741	Control	N/A
		PubMed Byun JY et al., Microbial cell factories, 2025 Feb 24;24(1):47	Indirect	RNA-seq - wt vs TF overexpression	Negative	CEN.PK2-1D	YPD medium (15h) (diauxic shift)	-3.68514118933151
			Indirect	RNA-seq - wt vs TF overexpression	Negative	CEN.PK2-1D	YPD medium (36h) (post-diauxic shift)	-1.93366024117306
			Indirect	RNA-seq analysis - TF Over-expression vs WT	Negative	cen.pk-2-1C	RNA extraction at 15h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase.	-12.8628746153528
			Indirect	RNA-seq analysis - TF Over-expression vs WT	Negative	cen.pk-2-1C	RNA extraction at 36h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase.	-3.82023196398042