S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Rpn4p	YDR119W	PubMed Salin H et al., BMC genomics, 2008 Jul 15;9():333	Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4742	Unstressed log-phase growth (control)	Grown in YPD medium at 30 ºC to and A600 of 0.5. Transcription factor gene deletion.	-0.572
			Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4742	Stress	Grown in YPD medium at 30 ºC to and A600 of 0.5. Sodium selenite (1 mM) treatment for 40 min. Transcription factor gene deletion.	-0.936
			Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4742	Stress	Grown in YPD medium at 30 ºC to and A600 of 0.5. Sodium selenite (1 mM) treatment for 60 min. Transcription factor gene deletion.	-0.759
			Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4742	Stress	Grown in YPD medium at 30 ºC to and A600 of 0.5. Sodium selenite (1 mM) treatment for 80 min. Transcription factor gene deletion.	-0.697
		PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Positive	BY4741; S288C; R1158	Unstressed log-phase growth (control)	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	0.34613643101982
		PubMed Kruegel U et al., PLoS genetics, 2011 Sep;7(9):e1002253	Indirect	Proteomics - wt vs TF mutant	Negative	S288c	Unstressed log-phase growth (control)	YPD medium; mid-log phase	N/A