S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition	Log2FC
Rpn4p	YGR249W	PubMed Haugen AC et al., Genome biology, 2004;5(12):R95	Indirect	Microarray analysis - WT vs TF Deletion	Positive	BY4741	Grown in synthetic complete (SC) medium at 30°C to a density of 10^7 cells per mL. Transcription factor gene deletion.	1.50115969
		PubMed Salin H et al., BMC genomics, 2008 Jul 15;9():333	Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4742	Grown in YPD medium at 30 ºC to and A600 of 0.5. Transcription factor gene deletion.	-0.459
			Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4742	Grown in YPD medium at 30 ºC to and A600 of 0.5. Sodium selenite (1 mM) treatment for 40 min. Transcription factor gene deletion.	-0.168
			Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4742	Grown in YPD medium at 30 ºC to and A600 of 0.5. Sodium selenite (1 mM) treatment for 60 min. Transcription factor gene deletion.	-0.271
			Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4742	Grown in YPD medium at 30 ºC to and A600 of 0.5. Sodium selenite (1 mM) treatment for 80 min. Transcription factor gene deletion.	-0.145
		PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4741; S288C; R1158	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	-0.49839095485427