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Regulation Reference(s)
The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor |
Target
ORF/Genes |
References |
Evidence
Code |
Evidence
Experiment |
Association
Type |
Strain |
Environmental
Condition |
Log2FC |
|
Rap1p
|
YIR031C
|
PubMed 
Badis G et al., Molecular cell, 2008 Dec 26;32(6):878-87Badis G et al., Molecular cell, 2008 Dec 26;32(6):878-87 |
Direct |
ChIP |
N/A |
S288c |
N/A |
N/A |
|
PubMed
Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 |
Indirect |
Microarray analysis - WT vs TF Deletion |
Negative |
BY4741; S288C; R1158 |
Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. |
-0.40381444572279 |
|
PubMed
Byun JY et al., Microbial cell factories, 2025 Feb 24;24(1):47Byun JY et al., Microbial cell factories, 2025 Feb 24;24(1):47 |
Indirect |
RNA-seq - wt vs TF overexpression |
Negative |
CEN.PK2-1D |
YPD medium (15h) (diauxic shift) |
-1.64893261887464 |
| Indirect |
RNA-seq analysis - TF Over-expression vs WT |
Negative |
cen.pk-2-1C |
RNA extraction at 15h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase. |
-3.13601534516958 |
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