Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor
Target
ORF/Genes
References Evidence
Code
Evidence
Experiment
Association
Type
Strain Environmental
Group
Environmental
Condition
Log2FC
Pho4p YJL153C PubMed external link Chua G et al., Proceedings of the National Academy of Sciences of the United States of America, 2006 Aug 8;103(32):12045-50Chua G et al., Proceedings of the National Academy of Sciences of the United States of America, 2006 Aug 8;103(32):12045-50 Indirect Microarray analysis - wt vs TF overexpression Negative N/A Carbon source quality/availability Cells grown in selective medium supplemented with 2% raffinose before induction with 2% galactose for 3 h N/A
PubMed external link Shetty A et al., Eukaryotic cell, 2010 Dec;9(12):1845-55Shetty A et al., Eukaryotic cell, 2010 Dec;9(12):1845-55 Indirect lacZ - wt vs TF mutant Positive S288c Unstressed log-phase growth (control) Without Inositol and Choline high phosphate N/A
Indirect lacZ - wt vs TF mutant Positive S288c Ion/metal/phosphate/sulfur/vitamin availability Without Inositol and Choline low phosphate N/A
PubMed external link He BZ et al., eLife, 2017 May 9;6():He BZ et al., eLife, 2017 May 9;6(): Indirect RNA-seq analysis - WT vs TF Deletion Positive K699 Unstressed log-phase growth (control) 100 ml of cell culture grown to OD600nm (600 nm) of 1.5. 0.976561995030437
Indirect RNA-seq analysis - WT vs TF Deletion Positive K699 Ion/metal/phosphate/sulfur/vitamin availability Grown in phosphate-free SC medium (Phosphate starvation) at 30°C with shaking. All transcriptional profiling experiments were done in the pho80∆ background. Transcription factor gene deletion. 0.976561995030437