Yeastract
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor
Target
ORF/Genes
References Evidence
Code
Evidence
Experiment
Association
Type
Strain Environmental
Condition
Log2FC
Rap1p YJR008W PubMed external link Alenquer M et al., FEMS yeast research, 2006 Dec;6(8):1130-9Alenquer M et al., FEMS yeast research, 2006 Dec;6(8):1130-9 Indirect Microarray analysis - WT vs TF Deletion Negative W303a Grown in complete synthetic medium (CSM) when selection was required, or in rich medium (YPD) at 30°C. Temperature shift experiment: exponentially growing yeast cells grown in YPD (A600 = 0.8 − 1.2) at 37°C for 1 h. Transcription factor gene deletion. -1.07169967
PubMed external link Byun JY et al., Microbial cell factories, 2025 Feb 24;24(1):47Byun JY et al., Microbial cell factories, 2025 Feb 24;24(1):47 Indirect RNA-seq - wt vs TF overexpression Positive CEN.PK2-1D YPD medium (15h) (diauxic shift) 1.52605191069962
Indirect RNA-seq - wt vs TF overexpression Positive CEN.PK2-1D YPD medium (36h) (post-diauxic shift) 1.05508930587756
Indirect RNA-seq analysis - TF Over-expression vs WT Positive cen.pk-2-1C RNA extraction at 15h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase. 2.87996626140574
Indirect RNA-seq analysis - TF Over-expression vs WT Positive cen.pk-2-1C RNA extraction at 36h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase. 2.0778468257322