Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Condition		 Log2FC
Bas1p YKL164C PubMed external link Fendt SM et al., Molecular systems biology, 2010 Nov 30;6():432Fendt SM et al., Molecular systems biology, 2010 Nov 30;6():432 Indirect Microarray analysis - wt vs TF mutant Positive S288c YPD medium; mid-log phase N/A
PubMed external link Yi DG et al., FEBS letters, 2015 Aug 19;589(18):2409-16Yi DG et al., FEBS letters, 2015 Aug 19;589(18):2409-16 Indirect RNA-seq analysis - WT vs TF Deletion Positive SK1 Cells from a stationary culture in YPD medium were inoculated into fresh YPD medium to a final concentration equivalent to an A 600 of 0.25, and grown at 30 °C for 12 h. 0.642905555819431
Indirect RNA-seq analysis - WT vs TF Deletion Positive SK1 Cells were grown in YPA for 13.5–14 hr at 30°, harvested, resuspended in 2% potassium acetate, and sporulated at 30°. Then, 15 OD600 units of cells were collected at 4 hr in meiosis for RNAseq. Transcription factor gene deletion. 0.642905555819431
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 YPD medium, 25.C N/A