S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Msn4p	YLR178C	PubMed Boy-Marcotte E et al., Molecular microbiology, 1999 Jul;33(2):274-83	Indirect	Proteomics - wt vs TF mutant	Positive	W303-A	Stress	Heat-shock: Exponential-phase cells shifted from 25C to 38C	N/A
		PubMed Garcia SC et al., FEMS microbiology letters, 2000 Mar 15;184(2):219-24	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	Stress	YPD + 0,5M NaCl	N/A
		PubMed Hasan R et al., Molecular microbiology, 2002 Jul;45(1):233-41	Indirect	Proteomics - wt vs TF mutant	Positive	YPH98	Stress	Oxidative stess; cells grown in YNB medium to exponential phase exposed to 0.5 mM H2O2 for 30 min	N/A
			Indirect	2D electrophoresis (WT vs msn2DELTAmsn4DELTAyap1DELTA triple mutant)	Positive	YPH98	Stress	Oxidative stess; cells grown in YNB medium to exponential phase exposed to 0.5 mM H2O2 for 30 min	N/A
		PubMed Schüller C et al., Molecular biology of the cell, 2004 Feb;15(2):706-20	Indirect	Microarray analysis - wt vs TF mutant	Positive	W303 msn2 msn4	Stress	YPD medium, 30.C,cell were grown until an OD600 of 1-1.1 and then supplemented with 8mM potassium sorbate	N/A
		PubMed Lenssen E et al., Molecular and cellular biology, 2005 Jan;25(1):488-98	Indirect	Microarray analysis - wt vs TF mutant	Positive	PEY78	Carbon source quality/availability	YPD medium; the cultures were grown until glucose was exhausted in the medium, and diauxic shift samples were harvested 30 min after glucose exhaustion.	N/A
		PubMed Horan S et al., Yeast (Chichester, England), 2006 May;23(7):519-35	Indirect	Microarray analysis - wt vs TF mutant	Positive	W303-1B	Stress	Cells harvested 60 min after treatment with 3 mM NO donor (Z)-1-[2-(2-aminoethyl)-N-(2-ammonioethyl) aminodiazen-1-ium-1,2-diolate (DETA NONOate)	N/A
		PubMed Eastmond DL et al., The Journal of biological chemistry, 2006 Oct 27;281(43):32909-21	Indirect	Microarray analysis - wt vs TF mutant	Positive	W303-1A	Stress	Cells grown in YPAD at 30.C to mid-log phase (A600 of 0.5) submitted to heat-shock (37.C, 15 min)	N/A
		PubMed Capaldi AP et al., Nature genetics, 2008 Nov;40(11):1300-6	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	Stress	YPD medium containing 0,8M glucose (glucose "osmotic" stress)	N/A
		PubMed Kelley R et al., PLoS genetics, 2009 May;5(5):e1000488	Indirect	Microarray analysis - wt vs TF mutant	Positive	BY4741	Stress	YPD 30.C from 0.1 mM H2O2 to 0.4 mM H2O2	N/A
		PubMed Hazelwood LA et al., Applied and environmental microbiology, 2009 Nov;75(21):6876-85	Indirect	Microarray analysis - wt vs TF mutant	Positive	IMZ066	Nitrogen source quality/availability	Nitrogen-limiting (45 g/L glucose, 1 g/L (NH4)2SO4, 5.3 g/L K2SO4, 3 KH2PO4, 0.5 g/L MgSO4.7H2O, 0.0045 g/L ZnSO4.7H2O)	N/A
		PubMed Casado C et al., The Biochemical journal, 2011 Sep 15;438(3):523-33	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	Stress	10 min shift to pH=8	N/A