Yeastract
YEASTRACT+ INESC-ID IST IBB
Home > Go Back > View Contact/Credits     Tutorial     Help

 

Back to top top

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Condition		 Log2FC
Gal4p YML052W PubMed external link Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804Lee TI et al., Science (New York, N.Y.), 2002 Oct 25;298(5594):799-804 Direct Chip-on-chip N/A S288c YPD medium; mid-log phase N/A
PubMed external link Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 Direct Chip-on-chip N/A S288c N/A N/A
PubMed external link Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - WT vs TF Deletion Positive BY4741; S288C; R1158 Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. 0.49313934800433
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 YPD medium, 25.C N/A
PubMed external link Huo Y et al., Communications biology, 2025 Feb 27;8(1):325Huo Y et al., Communications biology, 2025 Feb 27;8(1):325 Indirect RNA-seq analysis - TF Over-expression vs WT Positive FY4 F+P,10h: Cells were cultured in Delft minimal media supplemented with fructose and palatinose at 30°C, 180 rpm and harvested 10h after mid-log phase. 6.809918
Indirect RNA-seq analysis - TF Over-expression vs WT Positive FY4 F,10h: Cells were cultured in Delft minimal media supplemented with fructose at 30°C, 180 rpm and harvested 10h after mid-log phase. 7.294178
Indirect RNA-seq analysis - TF Over-expression vs WT Positive FY4 F+P,16h: Cells were cultured in Delft minimal media supplemented with fructose and palatinose at 30°C, 180 rpm and harvested 16h after mid-log phase. 6.851606
Indirect RNA-seq analysis - TF Over-expression vs WT Positive FY4 F,16h: Cells were cultured in Delft minimal media supplemented with fructose at 30°C, 180 rpm and harvested 16h after mid-log phase. 7.011261
Indirect RNA-seq analysis - TF Over-expression vs WT Positive FY4 F+P,0h: Cells were cultured in Delft minimal media supplemented with fructose and palatinose at 30°C, 180 rpm and harvested at mid-log phase (OD ~0.3). 7.19941
Indirect RNA-seq analysis - TF Over-expression vs WT Positive FY4 F,0h: Cells were cultured in Delft minimal media supplemented with fructose at 30°C, 180 rpm and harvested at mid-log phase (OD ~0.3). 6.710101