Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Msn4p YMR173W PubMed external link Boy-Marcotte E et al., Molecular microbiology, 1999 Jul;33(2):274-83Boy-Marcotte E et al., Molecular microbiology, 1999 Jul;33(2):274-83 Indirect Proteomics - wt vs TF mutant Positive W303-A Stress Heat-shock: Exponential-phase cells shifted from 25C to 38C N/A
PubMed external link Hasan R et al., Molecular microbiology, 2002 Jul;45(1):233-41Hasan R et al., Molecular microbiology, 2002 Jul;45(1):233-41 Indirect Proteomics - wt vs TF mutant Positive YPH98 Stress Oxidative stess; cells grown in YNB medium to exponential phase exposed to 0.5 mM H2O2 for 30 min N/A
PubMed external link Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 Direct Chip-on-chip N/A S288c N/A N/A N/A
PubMed external link Horan S et al., Yeast (Chichester, England), 2006 May;23(7):519-35Horan S et al., Yeast (Chichester, England), 2006 May;23(7):519-35 Indirect Microarray analysis - wt vs TF mutant Positive W303-1B Stress Cells harvested 60 min after treatment with 3 mM NO donor (Z)-1-[2-(2-aminoethyl)-N-(2-ammonioethyl) aminodiazen-1-ium-1,2-diolate (DETA NONOate) N/A
PubMed external link Eastmond DL et al., The Journal of biological chemistry, 2006 Oct 27;281(43):32909-21Eastmond DL et al., The Journal of biological chemistry, 2006 Oct 27;281(43):32909-21 Indirect Microarray analysis - wt vs TF mutant Positive W303-1A Stress Cells grown in YPAD at 30.C to mid-log phase (A600 of 0.5) submitted to heat-shock (37.C, 15 min) N/A
PubMed external link Capaldi AP et al., Nature genetics, 2008 Nov;40(11):1300-6Capaldi AP et al., Nature genetics, 2008 Nov;40(11):1300-6 Indirect Microarray analysis - wt vs TF mutant Positive S288c Stress YPD medium + 0,4M KCl (salt stress) N/A
PubMed external link Kelley R et al., PLoS genetics, 2009 May;5(5):e1000488Kelley R et al., PLoS genetics, 2009 May;5(5):e1000488 Indirect Microarray analysis - wt vs TF mutant Positive BY4741 Stress YPD 30.C from 0.1 mM H2O2 to 0.4 mM H2O2 N/A
PubMed external link Hazelwood LA et al., Applied and environmental microbiology, 2009 Nov;75(21):6876-85Hazelwood LA et al., Applied and environmental microbiology, 2009 Nov;75(21):6876-85 Indirect Microarray analysis - wt vs TF mutant Positive IMZ066 Carbon source quality/availability Carbon-limiting (25 g/L glucose, 5 g/L (NH4)2SO4, 3 KH2PO4, 0.5 g/L MgSO4.7H2O, 0.0045 g/L ZnSO4.7H2O) N/A
Indirect Microarray analysis - wt vs TF mutant Positive IMZ066 Nitrogen source quality/availability Nitrogen-limiting (45 g/L glucose, 1 g/L (NH4)2SO4, 5.3 g/L K2SO4, 3 KH2PO4, 0.5 g/L MgSO4.7H2O, 0.0045 g/L ZnSO4.7H2O) N/A