S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Sfl1p	YMR173W	PubMed Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77	Indirect	Microarray analysis - WT vs TF Deletion	Negative	BY4741; S288C; R1158	Unstressed log-phase growth (control)	Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion.	-1.1664482014468
		PubMed Cromie GA et al., G3 (Bethesda, Md.), 2017 Aug 7;7(8):2845-2854	Indirect	RNA-seq analysis - TF Over-expression vs WT	Negative	F45	Unstressed log-phase growth (control)	Yeast cultures were grown in synthetic (SM) or rich (YP) medium to OD 600 of 1.0.	-1.97760094720155
			Indirect	RNA-seq analysis - TF Over-expression vs WT	Negative	F45	Unstressed log-phase growth (control)	4 days of growth on YPD (with 2% glucose plus G418 to maintain plasmid selection) plates at 30 °C. Transcription factor gene overexpression.	-1.97760094720155
		PubMed Cromie GA et al., PloS one, 2024;19(12):e0311061	Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	F13	Cell cycle/morphology	Grown on YPD (2% glucose) agar plates at 30° C for 2 days, 3–5 colonies were pooled per sample. Transcription factor gene deletion.	-1.74076206001414
		PubMed Cromie GA et al., PloS one, 2024;19(12):e0311061	Indirect	RNA-seq analysis - WT vs TF Deletion	Negative	F13	Cell cycle/morphology	Grown on YPD (2% glucose) agar plates at 30° C for 5 days, 3–5 colonies were pooled per sample. The structured outside region of the colonies was used for the wild-type. Transcription factor gene deletion.	-1.67054755984768