Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Condition		 Log2FC
Rph1p YNL193W PubMed external link Cipollina C et al., Microbiology (Reading, England), 2008 Jan;154(Pt 1):337-346Cipollina C et al., Microbiology (Reading, England), 2008 Jan;154(Pt 1):337-346 Indirect Microarray analysis - WT vs TF Deletion Negative SLY34 Grown in rich medium (YPD) at 30 °C to log phase. Transcription factor gene deletion. -0.168147
PubMed external link Schroeder EA et al., Cell metabolism, 2013 Jun 4;17(6):954-964Schroeder EA et al., Cell metabolism, 2013 Jun 4;17(6):954-964 Indirect Microarray analysis - wt vs TF mutant Negative S288c Addition of 50mM menadione or ethanol N/A
PubMed external link Glazier VE et al., mBio, 2023 Oct 31;14(5):e0152123Glazier VE et al., mBio, 2023 Oct 31;14(5):e0152123 Indirect RNA-seq analysis - WT vs TF Deletion Positive BY4741 Cultured in minimal medium (1.7 g/L YNB, 5 g/L ammonium sulfate, 20 g/L glucose, 80 mg/L histidine, 80 mg/L methionine, 80 mg/L uracil and 240 mg/L leucine) with 200 rpm orbital shaking at 30°C, pH 5.5, until the mid-exponential phase (OD600 = 0.6). Transcription factor gene deletion. 0.712161944600076