S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Condition	Log2FC
Rap1p	YOL084W	PubMed Kasahara K et al., Molecular and cellular biology, 2007 Oct;27(19):6686-705	Direct	Chip-on-chip	N/A	S288c	YPD	N/A
		PubMed Byun JY et al., Microbial cell factories, 2025 Feb 24;24(1):47	Indirect	RNA-seq - wt vs TF overexpression	Positive	CEN.PK2-1D	YPD medium (15h) (diauxic shift)	1.17058330626593
			Indirect	RNA-seq - wt vs TF overexpression	Positive	CEN.PK2-1D	YPD medium (36h) (post-diauxic shift)	1.07211796810655
			Indirect	RNA-seq - wt vs TF overexpression	Negative	CEN.PK2-1D	YPD medium (9h) control	-1.04431721220476
			Indirect	RNA-seq analysis - TF Over-expression vs WT	Positive	cen.pk-2-1C	RNA extraction at 15h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase.	2.25102691407171
			Indirect	RNA-seq analysis - TF Over-expression vs WT	Positive	cen.pk-2-1C	RNA extraction at 36h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase.	2.10251773246674
			Indirect	RNA-seq analysis - TF Over-expression vs WT	Negative	cen.pk-2-1C	RNA extraction at 9h. Medium: YPD (1% yeast extract, 2% peptone, 2% glucose) or synthetic complete (SC) medium supplemented as required for auxotrophic markers. Temperature: 30°C, aerobic shaking. Growth phase: exponential or stationary phase.	-2.06239005522845