Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Group		 Environmental
Condition		 Log2FC
Aft1p YOR316C PubMed external link Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104Harbison CT et al., Nature, 2004 Sep 2;431(7004):99-104 Direct Chip-on-chip N/A S288c N/A N/A N/A
PubMed external link Courel M et al., Molecular and cellular biology, 2005 Aug;25(15):6760-71Courel M et al., Molecular and cellular biology, 2005 Aug;25(15):6760-71 Indirect Microarray analysis - wt vs TF mutant Negative Y14438 Ion/metal/phosphate/sulfur/vitamin availability Iron-depleted conditions - Defined medium (iron-limiting and copper-limiting yeast nitrogen base ); 30.C. N/A
PubMed external link Dubacq C et al., Molecular genetics and genomics : MGG, 2006 Feb;275(2):114-24Dubacq C et al., Molecular genetics and genomics : MGG, 2006 Feb;275(2):114-24 Indirect Microarray analysis - wt vs TF mutant Positive S288c Stress YPD medium + 200mM hydroxyurea N/A
PubMed external link Pagani MA et al., Molecular microbiology, 2007 Jul;65(2):521-37Pagani MA et al., Molecular microbiology, 2007 Jul;65(2):521-37 Indirect Microarray analysis - WT vs TF Deletion Negative BY4741 Unstressed log-phase growth (control) Grown in YPD to OD = 0.8 at 28°C. Centrifugation and resuspension in fresh YPD for periods of 30 and 60 min. Transcription factor gene deletion. N/A
PubMed external link Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - WT vs TF Deletion Negative BY4741; S288C; R1158 Unstressed log-phase growth (control) Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. -0.46977682085953