S.cerevisiae - Yeastract

Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.

Transcription Factor	Target ORF/Genes	References	Evidence Code	Evidence Experiment	Association Type	Strain	Environmental Group	Environmental Condition	Log2FC
Msn2p	YOR374W	PubMed Aranda A et al., Yeast (Chichester, England), 2003 Jun;20(8):747-59	Indirect	Northern blot - wt vs TF mutant	Positive	S288c	Stress	Acetaldehyde stress; Exponential-phase cells cultivated for 1 h in YPD supplemented with 1 g/L acetaldehyde	N/A
		PubMed Eastmond DL et al., The Journal of biological chemistry, 2006 Oct 27;281(43):32909-21	Indirect	Microarray analysis - wt vs TF mutant	Positive	W303-1A	Stress	Cells grown in YPAD at 30.C to mid-log phase (A600 of 0.5) submitted to heat-shock (37.C, 15 min)	N/A
		PubMed Berry DB et al., Molecular biology of the cell, 2008 Nov;19(11):4580-7	Indirect	Microarray analysis - wt vs TF mutant	Positive	BY4741	Stress	YPD+0.7 M NaCl 45min	N/A
		PubMed Capaldi AP et al., Nature genetics, 2008 Nov;40(11):1300-6	Indirect	Microarray analysis - wt vs TF mutant	Positive	S288c	Stress	YPD medium + 0,4M KCl (salt stress)	N/A
		PubMed Kelley R et al., PLoS genetics, 2009 May;5(5):e1000488	Indirect	Microarray analysis - wt vs TF mutant	Positive	BY4741	Stress	YPD 30.C 0.1 mM H2O2	N/A
		PubMed Stewart-Ornstein J et al., Current biology : CB, 2013 Dec 2;23(23):2336-45	Indirect	GFP - wt vs TF overexpression	Positive	S288c	Stress	Estradiol induced	N/A
		PubMed Elfving N et al., Nucleic acids research, 2014 May;42(9):5468-82	Indirect	Microarray analysis - wt vs TF overexpression	Positive	S288c	Unstressed log-phase growth (control)	SD + glucose + estradiol induction	N/A
		PubMed Kuang Z et al., eLife, 2017 Sep 26;6():Kuang Z et al., eLife, 2017 Sep 26;6():	Direct	ChIP-seq	N/A	BY5764	Unstressed log-phase growth (control)	YPD 30.C	N/A
		PubMed Pfanzagl V et al., Molecular biology of the cell, 2018 Nov 15;29(23):2848-2862	Indirect	Microarray analysis - wt vs TF mutant	Positive	W303-1A	Unstressed log-phase growth (control)	YPD 30.C	N/A
		PubMed Vamvakas SS et al., Biotechnology progress, 2019 Mar;35(2):e2759	Indirect	RT-PCR - wt vs TF mutant	N/A	W303-1A	Stress	complete synthetic medium at 30.C, 6% v/v alcohol, aerobic growth	N/A