Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Condition		 Log2FC
Rpn4p YPL014W PubMed external link Salin H et al., BMC genomics, 2008 Jul 15;9():333Salin H et al., BMC genomics, 2008 Jul 15;9():333 Indirect Microarray analysis - WT vs TF Deletion Positive BY4742 Grown in YPD medium at 30 ºC to and A600 of 0.5. Transcription factor gene deletion. 0.62
Indirect Microarray analysis - WT vs TF Deletion Positive BY4742 Grown in YPD medium at 30 ºC to and A600 of 0.5. Sodium selenite (1 mM) treatment for 40 min. Transcription factor gene deletion. 0.458
Indirect Microarray analysis - WT vs TF Deletion Positive BY4742 Grown in YPD medium at 30 ºC to and A600 of 0.5. Sodium selenite (1 mM) treatment for 60 min. Transcription factor gene deletion. 0.914
Indirect Microarray analysis - WT vs TF Deletion Positive BY4742 Grown in YPD medium at 30 ºC to and A600 of 0.5. Sodium selenite (1 mM) treatment for 80 min. Transcription factor gene deletion. 0.38
PubMed external link Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - WT vs TF Deletion Negative BY4741; S288C; R1158 Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. -1.6436656823546
PubMed external link Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314Rossi MJ et al., Nature, 2021 Apr;592(7853):309-314 Direct ChIP-exo N/A BY4741 YPD medium, 25.C N/A