Yeastract
YEASTRACT+ INESC-ID IST IBB
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Regulation Reference(s)

The Yeastract team, is actively curating each regulation evidence code, association type and environmental condition.
Transcription
Factor		 Target
ORF/Genes		 References Evidence
Code		 Evidence
Experiment		 Association
Type		 Strain Environmental
Condition		 Log2FC
Rlm1p YPL089C PubMed external link García R et al., The Journal of biological chemistry, 2004 Apr 9;279(15):15183-95García R et al., The Journal of biological chemistry, 2004 Apr 9;279(15):15183-95 Indirect Microarray analysis - wt vs TF mutant Positive S288c Congo red N/A
PubMed external link Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77Reimand J et al., Nucleic acids research, 2010 Aug;38(14):4768-77 Indirect Microarray analysis - WT vs TF Deletion Positive BY4741; S288C; R1158 Standard YPD conditions Dataset ewxtracted from The Longhorn Array Database (LAD). Transcription factor gene deletion. 0.87201193252461
PubMed external link Sanz AB et al., Molecular biology of the cell, 2012 Jul;23(14):2805-17Sanz AB et al., Molecular biology of the cell, 2012 Jul;23(14):2805-17 Indirect Microarray analysis - WT vs TF Deletion Positive BY4741 Grown overnight in YPD liquid media at 220 rpm and 24°C to an OD600 ~ 0.8–1. The culture was refreshed to OD600 = 0.2 in YPD, grown for an additional 2 h. Transcription factor gene deletion. 4.473333
PubMed external link García R et al., Journal of cell science, 2016 Apr 15;129(8):1649-60García R et al., Journal of cell science, 2016 Apr 15;129(8):1649-60 Direct ChIP N/A S288c YPD 30.C + 30 microg/ml Congo Red (3 hours) N/A